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Mobile elements contribute to the uniqueness of human genome with 15,000 human-specific insertions and 14 Mbp sequence increase

JOURNAL ARTICLE published 1 October 2018 in DNA Research

Authors: Wanxiangfu Tang | Seyoung Mun | Aditya Joshi | Kyudong Han | Ping Liang

Locus-specific ChIP combined with NGS analysis reveals genomic regulatory regions that physically interact with the Pax5 promoter in a chicken B cell line

JOURNAL ARTICLE published 1 October 2017 in DNA Research

Authors: Toshitsugu Fujita | Fusako Kitaura | Miyuki Yuno | Yutaka Suzuki | Sumio Sugano | Hodaka Fujii

Multiple hybrid de novo genome assembly of finger millet, an orphan allotetraploid crop

JOURNAL ARTICLE published 1 February 2018 in DNA Research

Authors: Masaomi Hatakeyama | Sirisha Aluri | Mathi Thumilan Balachadran | Sajeevan Radha Sivarajan | Andrea Patrignani | Simon Grüter | Lucy Poveda | Rie Shimizu-Inatsugi | John Baeten | Kees-Jan Francoijs | Karaba N Nataraja | Yellodu A Nanja Reddy | Shamprasad Phadnis | Ramapura L Ravikumar | Ralph Schlapbach | Sheshshayee M Sreeman | Kentaro K Shimizu

Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes

JOURNAL ARTICLE published 2007 in DNA Research

Authors: Ken Kurokawa | Takehiko Itoh | Tomomi Kuwahara | Kenshiro Oshima | Hidehiro Toh | Atsushi Toyoda | Hideto Takami | Hidetoshi Morita | Vineet K. Sharma | Tulika P. Srivastava | Todd D. Taylor | Hideki Noguchi | Hiroshi Mori | Yoshitoshi Ogura | Dusko S. Ehrlich | Kikuji Itoh | Toshihisa Takagi | Yoshiyuki Sakaki | Tetsuya Hayashi | Masahira Hattori

Co-adaption of tRNA gene copy number and amino acid usage influences translation rates in three life domains

JOURNAL ARTICLE published 1 December 2017 in DNA Research

Research funded by National Natural Science Foundation of China (31501063)

Authors: Meng-Ze Du | Wen Wei | Lei Qin | Shuo Liu | An-Ying Zhang | Yong Zhang | Hong Zhou | Feng-Biao Guo

Genome-wide profiling of Sus scrofa circular RNAs across nine organs and three developmental stages

JOURNAL ARTICLE published 1 October 2017 in DNA Research

Research funded by National Natural Science Foundation of China (31171192, 31330074)

Authors: Guoming Liang | Yalan Yang | Guanglin Niu | Zhonglin Tang | Kui Li

Tagged Mutagenesis and Gene-trap in the Moss, Physcomitrella patens by Shuttle Mutagenesis

JOURNAL ARTICLE published 1 January 2000 in DNA Research

Authors: T. Nishiyama

Prediction of Translation Initiation Sites on the Genome of Synechocystis sp. Strain PCC6803 by Hidden Markov Model

JOURNAL ARTICLE published 1 January 1997 in DNA Research

Authors: M. Hirosawa

Assignment of Human Membrane-type Matrix Metalloproteinase-2 (MT2-MMP) Gene to 16q12 by FISH and PCR-based Human/Rodent Cell Hybrid Mapping Panel Analysis

JOURNAL ARTICLE published 1 January 1997 in DNA Research

Authors: H. Yasumitsu

OTUX: V-region specific OTU database for improved 16S rRNA OTU picking and efficient cross-study taxonomic comparison of microbiomes

JOURNAL ARTICLE published 1 April 2019 in DNA Research

Authors: Deepak Yadav | Anirban Dutta | Sharmila S Mande

Editors: Kenta Nakai

Nucleotide Sequence Surrounding the Locus Marker D21S246 on Human Chromosome 21

JOURNAL ARTICLE published 1 January 1995 in DNA Research

Authors: M. Yamazaki

A 19-kb CpG Island Associated with Single-minded Gene 2 in Down Syndrome Chromosomal Region

JOURNAL ARTICLE published 1 January 1996 in DNA Research

Authors: K. Osoegawa | S. Okano | Y. Kato | Y. Nishimura | E. Soeda

Comparative Analysis of Mouse NotI Linking Clones with Mouse and Human Genomic Sequences and Transcripts

JOURNAL ARTICLE published 1 January 1995 in DNA Research

Authors: C. Plass

Identification of Cis-Acting Promoter Elements in Cold- and Dehydration-Induced Transcriptional Pathways in Arabidopsis, Rice, and Soybean

JOURNAL ARTICLE published 1 February 2012 in DNA Research

Authors: K. Maruyama | D. Todaka | J. Mizoi | T. Yoshida | S. Kidokoro | S. Matsukura | H. Takasaki | T. Sakurai | Y. Y. Yamamoto | K. Yoshiwara | M. Kojima | H. Sakakibara | K. Shinozaki | K. Yamaguchi-Shinozaki

Large-Scale Analysis of Gene Expression Profiles during Early Stages of Root Nodule Formation in a Model Legume, Lotus japonicus

JOURNAL ARTICLE published 1 January 2004 in DNA Research

Authors: H. Kouchi

Long-read metagenomics of multiple displacement amplified DNA of low-biomass human gut phageomes by SACRA pre-processing chimeric reads

JOURNAL ARTICLE published 11 October 2021 in DNA Research

Research funded by Leading Advanced Projects for Medical Innovation (19gm0010003h0204)

Authors: Yuya Kiguchi | Suguru Nishijima | Naveen Kumar | Masahira Hattori | Wataru Suda

Comprehensive Functional Analyses of Expressed Sequence Tags in Common Wheat (Triticum aestivum)

JOURNAL ARTICLE published 1 April 2012 in DNA Research

Authors: A. Manickavelu | K. Kawaura | K. Oishi | T. Shin-I | Y. Kohara | N. Yahiaoui | B. Keller | R. Abe | A. Suzuki | T. Nagayama | K. Yano | Y. Ogihara

Chromosome-level Genome Assembly of the Yeast Lodderomyces beijingensis Reveals the Genetic Nature of Metabolic Adaptations and Identifies Subtelomeres as Hotspots for Amplification of Mating Type Loci

JOURNAL ARTICLE published 30 April 2024 in DNA Research

Authors: Broňa Brejová | Viktória Hodorová | Sofia Mutalová | Andrea Cillingová | Ľubomír Tomáška | Tomáš Vinař | Jozef Nosek

CONTENTS OF VOLUME 12

JOURNAL ARTICLE published 23 February 2006 in DNA Research

Physical Mapping of Rice Chromosomes 4 and 7 Using YAC Clones

JOURNAL ARTICLE published 1 January 1997 in DNA Research

Authors: K. Koike